Annotation Cache

SnpEff Cache

Since the SnpEff cache is stored on the cloud, an extra layer of organization was added. The cache is organized by genome build / SnpEff cache version. Running this command with --no-sign-request, will allow you to see the contents of the bucket:

aws s3 ls s3://annotation-cache/snpeff_cache/
    PRE GRCh37.87/
    PRE GRCh38.105/
    PRE GRCm38.99/
    PRE WBcel235.105/
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This resource was developed by Maxime U. Garcia, bioinformatician at Seqera in Barcelona | Stockholm. It is based on SnpEff and VEP ressources. It was created for the nf-core community, and has been uploaded to S3 with the help of Nextflow and Seqera Platform. All of that was made possible by Open Data on AWS.